Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm25761-201ENSMUST00000103983 128 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm13573-201ENSMUST00000116410 631 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm12987-201ENSMUST00000118562 489 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm15009-201ENSMUST00000121387 322 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm11581-201ENSMUST00000122024 763 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm23434-201ENSMUST00000157179 100 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm20480-201ENSMUST00000173953 250 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm20549-201ENSMUST00000174804 429 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Mir6919-201ENSMUST00000185146 62 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm29352-201ENSMUST00000188054 544 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm37191-201ENSMUST00000193346 388 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm43602-201ENSMUST00000196772 300 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm7546-202ENSMUST00000211354 275 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm45782-201ENSMUST00000212670 366 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 AC171241.2-201ENSMUST00000228744 892 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm36952-201ENSMUST00000194923 3625 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Phc3-202ENSMUST00000064718 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim35Q8C006 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm15206-201ENSMUST00000119143 454 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Mir1903-201ENSMUST00000122574 80 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm16276-201ENSMUST00000131218 262 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim35Q8C006 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm22811-201ENSMUST00000157468 154 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm24860-201ENSMUST00000158457 276 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm25714-201ENSMUST00000158626 296 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Mir3085-201ENSMUST00000175493 89 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Mir6415-201ENSMUST00000184064 100 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Mir6912-201ENSMUST00000184456 70 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm37609-201ENSMUST00000191778 678 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Snord80-202ENSMUST00000199023 77 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm45815-201ENSMUST00000220241 146 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 AC163357.1-201ENSMUST00000220847 233 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Mylf-ps-201ENSMUST00000222174 421 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Zfp637-211ENSMUST00000223041 1128 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim35Q8C006 mt-Tf-201ENSMUST00000082387 68 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm22748-201ENSMUST00000082493 136 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim35Q8C006 Gm38375-201ENSMUST00000194610 2227 ntBASIC8.01□□□□□ -1.13
Trim35Q8C006 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC8.01□□□□□ -1.13
Trim35Q8C006 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Trim35Q8C006 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim35Q8C006 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Trim35Q8C006 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim35Q8C006 Dennd6a-205ENSMUST00000224378 2424 ntBASIC8□□□□□ -1.13
Trim35Q8C006 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8□□□□□ -1.13
Trim35Q8C006 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC8□□□□□ -1.13
Trim35Q8C006 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms