Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Usp40Q8BWR4 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Usp40Q8BWR4 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Usp40Q8BWR4 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
Usp40Q8BWR4 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Usp40Q8BWR4 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Usp40Q8BWR4 Gm37834-201ENSMUST00000194517 3035 ntBASIC7.21□□□□□ -1.25
Usp40Q8BWR4 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Usp40Q8BWR4 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm13454-201ENSMUST00000118166 483 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm15421-202ENSMUST00000118224 399 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm13359-201ENSMUST00000119000 695 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm15275-201ENSMUST00000154752 347 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm26310-201ENSMUST00000157766 117 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm23513-201ENSMUST00000158181 133 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm22668-201ENSMUST00000158716 260 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm10048-201ENSMUST00000194196 372 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm5317-201ENSMUST00000204445 847 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm17766-201ENSMUST00000209223 442 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 AC115047.1-201ENSMUST00000213795 322 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm9512-201ENSMUST00000223112 497 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm2645-201ENSMUST00000223516 547 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm23796-201ENSMUST00000084011 160 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 AC152944.1-201ENSMUST00000220160 3101 ntBASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Usp40Q8BWR4 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm42860-201ENSMUST00000196492 3991 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm3675-201ENSMUST00000175904 1653 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm13607-201ENSMUST00000117875 539 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm11346-201ENSMUST00000118346 704 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm23534-201ENSMUST00000157539 97 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm22555-201ENSMUST00000157801 62 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm26000-201ENSMUST00000157991 107 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm25713-201ENSMUST00000158625 109 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm23022-201ENSMUST00000158768 180 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Samd15-201ENSMUST00000169669 1194 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm20674-201ENSMUST00000177452 369 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm24754-201ENSMUST00000177997 107 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm20832-201ENSMUST00000189076 665 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm37979-201ENSMUST00000193065 712 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm30638-201ENSMUST00000195570 656 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm36728-201ENSMUST00000195782 665 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm19739-201ENSMUST00000195941 153 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm32453-201ENSMUST00000204183 456 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm44604-201ENSMUST00000205475 496 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 AC156560.1-201ENSMUST00000221425 256 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 AC117656.3-204ENSMUST00000225656 859 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 AC130547.1-201ENSMUST00000228079 1047 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 AC129208.2-201ENSMUST00000228506 320 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm44248-201ENSMUST00000203079 1549 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Gm37137-201ENSMUST00000195138 2684 ntBASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp40Q8BWR4 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms