Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm11212-201ENSMUST00000118337 618 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm15745-201ENSMUST00000119807 115 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm12893-201ENSMUST00000121732 275 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm12317-201ENSMUST00000122307 319 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm23633-201ENSMUST00000175293 119 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm26828-201ENSMUST00000180640 172 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm6546-201ENSMUST00000192096 766 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm17775-201ENSMUST00000198542 258 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm14788-201ENSMUST00000119457 375 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm12734-201ENSMUST00000120228 948 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm18445-201ENSMUST00000195502 774 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm43919-201ENSMUST00000204303 364 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm8911-201ENSMUST00000213986 652 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Mir342-201ENSMUST00000083502 99 ntBASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
Herc4Q6PAV2 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm13487-201ENSMUST00000122240 864 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm22870-201ENSMUST00000157501 112 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm25332-201ENSMUST00000158038 105 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm23855-201ENSMUST00000158377 135 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Gm19885-201ENSMUST00000212853 343 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC5.24□□□□□ -1.57
Herc4Q6PAV2 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.24□□□□□ -1.57
Herc4Q6PAV2 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms