Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm15030-201ENSMUST00000119804 484 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm11350-201ENSMUST00000121436 870 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm14413-201ENSMUST00000122158 408 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm26404-201ENSMUST00000158498 109 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm17043-201ENSMUST00000164621 1283 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm8282-201ENSMUST00000187559 483 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm18529-201ENSMUST00000193025 1257 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm43044-201ENSMUST00000198091 379 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm44604-201ENSMUST00000205475 496 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm45690-201ENSMUST00000210775 246 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm18645-202ENSMUST00000212222 760 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim28Q62318 AC192616.1-201ENSMUST00000221922 132 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 Gm37598-201ENSMUST00000194506 1301 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.55□□□□□ -1.36
Trim28Q62318 Gm14711-201ENSMUST00000117056 217 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm11483-201ENSMUST00000119839 247 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm16463-201ENSMUST00000120527 721 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm15780-201ENSMUST00000121283 935 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm24371-201ENSMUST00000122662 267 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Gm22214-201ENSMUST00000157563 172 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm23819-201ENSMUST00000158744 109 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Gm37243-201ENSMUST00000193407 595 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 Gm42824-201ENSMUST00000199361 247 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim28Q62318 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm44690-201ENSMUST00000207984 382 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm17850-201ENSMUST00000210023 1154 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Gm46191-201ENSMUST00000218899 433 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Trim28Q62318 AC147639.1-201ENSMUST00000224216 661 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim28Q62318 Nsa2-203ENSMUST00000225410 974 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 AC154562.1-201ENSMUST00000226140 966 ntBASIC6.55□□□□□ -1.36
Trim28Q62318 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim28Q62318 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim28Q62318 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim28Q62318 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Gm12317-201ENSMUST00000122307 319 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Gm26490-201ENSMUST00000157879 140 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Gm29201-201ENSMUST00000189120 431 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Gm18150-201ENSMUST00000195341 645 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Gm42593-201ENSMUST00000198469 377 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Gm34224-201ENSMUST00000204606 364 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 AC131720.3-201ENSMUST00000219113 275 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms