Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.75□□□□□ -1.65
Trafd1Q3UDK1 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.75□□□□□ -1.65
Trafd1Q3UDK1 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.75□□□□□ -1.65
Trafd1Q3UDK1 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.75□□□□□ -1.65
Trafd1Q3UDK1 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trafd1Q3UDK1 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trafd1Q3UDK1 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.75□□□□□ -1.65
Trafd1Q3UDK1 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trafd1Q3UDK1 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm13213-201ENSMUST00000119668 474 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm22870-201ENSMUST00000157501 112 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm22698-201ENSMUST00000175375 108 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm27551-201ENSMUST00000184258 77 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm4557-201ENSMUST00000185826 907 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm4526-201ENSMUST00000186039 920 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm20561-201ENSMUST00000188131 292 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm8708-201ENSMUST00000188500 906 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trafd1Q3UDK1 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm15670-201ENSMUST00000117740 447 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Mir3473a-201ENSMUST00000175011 78 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm29668-201ENSMUST00000187802 315 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm18183-201ENSMUST00000191024 615 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm23626-201ENSMUST00000082458 133 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm25821-201ENSMUST00000093657 133 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Trafd1Q3UDK1 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm11346-201ENSMUST00000118346 704 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm26347-201ENSMUST00000157526 131 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm23116-201ENSMUST00000158481 67 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm16134-201ENSMUST00000161714 336 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm20657-201ENSMUST00000177079 515 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm16378-201ENSMUST00000179168 342 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 V1rg10-201ENSMUST00000183378 937 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Mir7031-201ENSMUST00000183860 65 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm6075-201ENSMUST00000186816 486 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms