Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm25525-201ENSMUST00000177701 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm26178-201ENSMUST00000177706 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm26465-201ENSMUST00000178517 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm24317-201ENSMUST00000178536 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm25021-201ENSMUST00000179184 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm22995-201ENSMUST00000179670 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm24424-201ENSMUST00000179714 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm24389-201ENSMUST00000179962 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm25672-201ENSMUST00000180111 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm29163-201ENSMUST00000188029 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm29641-201ENSMUST00000188955 259 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm36986-201ENSMUST00000195320 353 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm34224-201ENSMUST00000204606 364 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm18127-201ENSMUST00000208479 725 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm34005-201ENSMUST00000215834 282 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.94□□□□□ -1.46
Sox9Q04887 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm23815-201ENSMUST00000083231 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm23520-201ENSMUST00000093736 107 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox9Q04887 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Sox9Q04887 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Sox9Q04887 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox9Q04887 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm6175-201ENSMUST00000121351 400 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm25389-201ENSMUST00000157340 286 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm25227-201ENSMUST00000158204 112 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Mir1947-201ENSMUST00000158235 85 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm17154-201ENSMUST00000165748 431 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Sox9Q04887 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm28191-201ENSMUST00000189112 211 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm21006-201ENSMUST00000196930 667 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm43467-201ENSMUST00000197441 437 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm18100-201ENSMUST00000200897 452 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm17893-201ENSMUST00000203017 770 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm44050-201ENSMUST00000204263 527 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 AC153541.1-201ENSMUST00000213786 294 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm19936-201ENSMUST00000216414 838 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm4263-202ENSMUST00000221392 667 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm18618-201ENSMUST00000222211 473 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms