Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm3841-201ENSMUST00000191399 451 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm37715-201ENSMUST00000193206 235 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm43712-201ENSMUST00000198020 291 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm44472-201ENSMUST00000204922 943 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm45192-201ENSMUST00000206749 283 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm19786-201ENSMUST00000222589 580 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm9845-201ENSMUST00000056409 598 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm23628-201ENSMUST00000082464 173 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 n-R5s86-201ENSMUST00000083215 119 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm24608-201ENSMUST00000104381 136 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm26156-201ENSMUST00000116999 123 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm15560-201ENSMUST00000117107 643 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm11386-201ENSMUST00000117761 347 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm14794-201ENSMUST00000118181 192 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm13679-201ENSMUST00000118678 484 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm13593-201ENSMUST00000121329 692 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm25559-201ENSMUST00000157182 74 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm24444-201ENSMUST00000157244 308 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm26271-201ENSMUST00000158349 104 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm25534-201ENSMUST00000175365 125 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm27887-201ENSMUST00000184367 102 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm28579-201ENSMUST00000186143 369 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm18448-201ENSMUST00000186286 599 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm21654-201ENSMUST00000188086 691 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm29284-201ENSMUST00000188363 255 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm43856-201ENSMUST00000197004 369 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm42924-201ENSMUST00000197261 185 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm31211-201ENSMUST00000199170 253 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm44990-201ENSMUST00000203922 217 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm8999-201ENSMUST00000204951 969 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm44623-201ENSMUST00000207934 434 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm8863-201ENSMUST00000216630 926 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms