Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.69□□□□□ -1.66
Sox3P53784 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox3P53784 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Gm18442-201ENSMUST00000220925 639 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox3P53784 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Sox3P53784 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Sox3P53784 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox3P53784 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox3P53784 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Sox3P53784 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.69□□□□□ -1.66
Sox3P53784 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Sox3P53784 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Sox3P53784 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox3P53784 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox3P53784 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.68□□□□□ -1.66
Sox3P53784 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Gm23593-201ENSMUST00000104309 120 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm25726-201ENSMUST00000104529 129 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Mir879-201ENSMUST00000104703 76 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm14753-201ENSMUST00000118503 246 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm11822-201ENSMUST00000119177 415 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm11584-201ENSMUST00000120636 325 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm13162-201ENSMUST00000121481 454 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm22613-201ENSMUST00000122679 292 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Gm3339-201ENSMUST00000163462 475 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox3P53784 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox3P53784 Gm21856-201ENSMUST00000187547 696 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.68□□□□□ -1.66
Sox3P53784 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.68□□□□□ -1.66
Sox3P53784 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.68□□□□□ -1.66
Sox3P53784 Gm44431-201ENSMUST00000203500 413 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.68□□□□□ -1.66
Sox3P53784 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Gm5750-201ENSMUST00000218711 801 ntBASIC4.68□□□□□ -1.66
Sox3P53784 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.68□□□□□ -1.66
Sox3P53784 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox3P53784 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox3P53784 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox3P53784 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox3P53784 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox3P53784 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.68□□□□□ -1.66
Sox3P53784 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox3P53784 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.68□□□□□ -1.66
Sox3P53784 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox3P53784 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox3P53784 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.68□□□□□ -1.66
Sox3P53784 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Sox3P53784 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sox3P53784 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox3P53784 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox3P53784 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Sox3P53784 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox3P53784 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox3P53784 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox3P53784 Mir466i-201ENSMUST00000116924 121 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Gm14086-201ENSMUST00000117152 173 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Gm13195-201ENSMUST00000117229 261 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Gm14560-201ENSMUST00000118672 375 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Gm13532-201ENSMUST00000120373 240 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Gm25290-201ENSMUST00000122796 144 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.67□□□□□ -1.66
Sox3P53784 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Sox3P53784 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.67□□□□□ -1.66
Sox3P53784 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sox3P53784 Gm23121-201ENSMUST00000157653 173 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.67□□□□□ -1.66
Sox3P53784 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sox3P53784 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Gm37676-201ENSMUST00000195496 507 ntBASIC4.67□□□□□ -1.66
Sox3P53784 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.67□□□□□ -1.66
Sox3P53784 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.67□□□□□ -1.66
Sox3P53784 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.67□□□□□ -1.66
Sox3P53784 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.67□□□□□ -1.66
Sox3P53784 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms