Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 AC192616.2-201ENSMUST00000221482 3841 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cux1P53564 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cux1P53564 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cux1P53564 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cux1P53564 Gm43781-201ENSMUST00000197634 2681 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Gm43888-201ENSMUST00000204405 2587 ntBASIC7.11□□□□□ -1.27
Cux1P53564 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cux1P53564 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cux1P53564 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Gm11484-201ENSMUST00000119808 338 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Gm24224-201ENSMUST00000158828 258 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Mir5134-201ENSMUST00000175529 78 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Gm22243-201ENSMUST00000178754 120 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Gm38053-201ENSMUST00000193938 160 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Gm9560-201ENSMUST00000205012 1201 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Gm17780-201ENSMUST00000207142 612 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Cux1P53564 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Gm10933-201ENSMUST00000221891 1861 ntBASIC7.11□□□□□ -1.27
Cux1P53564 AC074315.1-201ENSMUST00000228801 214 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC7.11□□□□□ -1.27
Cux1P53564 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cux1P53564 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cux1P53564 AC122357.1-201ENSMUST00000221652 1515 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cux1P53564 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
Cux1P53564 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cux1P53564 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cux1P53564 Gm43185-201ENSMUST00000197507 2775 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cux1P53564 Gm13501-201ENSMUST00000118477 979 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC7.1□□□□□ -1.27
Cux1P53564 Gm22501-201ENSMUST00000158981 127 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Cux1P53564 Gm27896-201ENSMUST00000175162 317 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Gm20673-201ENSMUST00000177167 430 ntBASIC7.1□□□□□ -1.27
Cux1P53564 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cux1P53564 Gm44485-201ENSMUST00000199569 137 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Gm45458-201ENSMUST00000209900 522 ntBASIC7.1□□□□□ -1.27
Cux1P53564 AC153526.4-201ENSMUST00000217713 379 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Cux1P53564 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.1□□□□□ -1.27
Cux1P53564 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Cux1P53564 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cux1P53564 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
Cux1P53564 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cux1P53564 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cux1P53564 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Gm10723-201ENSMUST00000195366 6918 ntBASIC7.09□□□□□ -1.27
Cux1P53564 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Gm8051-201ENSMUST00000120464 466 ntBASIC7.09□□□□□ -1.27
Cux1P53564 Gm13973-201ENSMUST00000121371 894 ntBASIC7.09□□□□□ -1.27
Cux1P53564 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.09□□□□□ -1.27
Cux1P53564 Gm18183-201ENSMUST00000191024 615 ntBASIC7.09□□□□□ -1.27
Cux1P53564 Gm8790-201ENSMUST00000194108 322 ntBASIC7.09□□□□□ -1.27
Cux1P53564 Gm44354-201ENSMUST00000196017 143 ntBASIC7.09□□□□□ -1.27
Cux1P53564 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC7.09□□□□□ -1.27
Cux1P53564 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC7.09□□□□□ -1.27
Cux1P53564 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cux1P53564 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cux1P53564 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cux1P53564 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cux1P53564 CT009734.1-201ENSMUST00000227657 1687 ntBASIC7.08□□□□□ -1.28
Cux1P53564 Mir1193-201ENSMUST00000116761 121 ntBASIC7.08□□□□□ -1.28
Cux1P53564 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.08□□□□□ -1.28
Cux1P53564 Gm6802-202ENSMUST00000186566 126 ntBASIC7.08□□□□□ -1.28
Cux1P53564 Gm37881-201ENSMUST00000193001 421 ntBASIC7.08□□□□□ -1.28
Cux1P53564 Gm37495-201ENSMUST00000194590 264 ntBASIC7.08□□□□□ -1.28
Cux1P53564 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Cux1P53564 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
Cux1P53564 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Cux1P53564 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Cux1P53564 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cux1P53564 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Cux1P53564 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Cux1P53564 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC7.08□□□□□ -1.28
Cux1P53564 Gm43059-201ENSMUST00000202437 1388 ntBASIC7.08□□□□□ -1.28
Cux1P53564 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cux1P53564 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms