Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 AC122355.1-201ENSMUST00000228155 4184 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Rfx1P48377 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Rfx1P48377 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Rfx1P48377 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm45562-201ENSMUST00000210015 1537 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Rfx1P48377 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Rfx1P48377 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm25346-201ENSMUST00000104509 128 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Gm12396-201ENSMUST00000121600 306 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Gm11692-201ENSMUST00000122121 902 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm14651-201ENSMUST00000147192 442 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm20480-201ENSMUST00000173953 250 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm17777-201ENSMUST00000189740 1276 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm18296-201ENSMUST00000192475 783 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Gm42484-201ENSMUST00000196075 2104 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm5983-201ENSMUST00000197739 770 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Gm43018-201ENSMUST00000198075 1275 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm44002-201ENSMUST00000205134 594 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Api5-ps-201ENSMUST00000206607 577 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Rfx1P48377 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7.02□□□□□ -1.29
Rfx1P48377 AC123944.2-201ENSMUST00000215290 382 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm29486-201ENSMUST00000088648 372 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC7.02□□□□□ -1.29
Rfx1P48377 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Rfx1P48377 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.02□□□□□ -1.29
Rfx1P48377 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rfx1P48377 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC7.02□□□□□ -1.29
Rfx1P48377 Gm45160-201ENSMUST00000207112 3099 ntBASIC7.02□□□□□ -1.29
Rfx1P48377 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm38137-201ENSMUST00000193735 1401 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Rfx1P48377 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm13379-201ENSMUST00000118053 621 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm12099-201ENSMUST00000118660 750 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm14933-201ENSMUST00000118840 481 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm15113-201ENSMUST00000119280 836 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm11227-201ENSMUST00000119774 471 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm15387-201ENSMUST00000120421 648 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC7.01□□□□□ -1.29
Rfx1P48377 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm2619-202ENSMUST00000166777 651 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm2092-201ENSMUST00000178887 639 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm2759-201ENSMUST00000179938 639 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm37164-201ENSMUST00000192809 637 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm5842-201ENSMUST00000195073 622 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm43007-201ENSMUST00000197618 291 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms