Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC163032.1-201ENSMUST00000220671 2970 ntBASIC4.92□□□□□ -1.62
Cxcl12P40224 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cxcl12P40224 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cxcl12P40224 Gm43771-201ENSMUST00000202931 1578 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Cxcl12P40224 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Cxcl12P40224 Gm13172-201ENSMUST00000118685 256 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Gm8430-201ENSMUST00000119780 471 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Gm14725-201ENSMUST00000120324 828 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.91□□□□□ -1.62
Cxcl12P40224 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Gm24239-201ENSMUST00000157791 255 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Gm25264-201ENSMUST00000158519 117 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Mir5134-201ENSMUST00000175529 78 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Olfr1143-201ENSMUST00000090708 945 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC4.91□□□□□ -1.62
Cxcl12P40224 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Cxcl12P40224 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
Cxcl12P40224 AC155167.2-201ENSMUST00000226127 1945 ntBASIC4.91□□□□□ -1.62
Cxcl12P40224 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cxcl12P40224 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cxcl12P40224 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cxcl12P40224 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.9□□□□□ -1.62
Cxcl12P40224 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.9□□□□□ -1.62
Cxcl12P40224 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cxcl12P40224 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cxcl12P40224 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cxcl12P40224 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cxcl12P40224 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Cxcl12P40224 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Cxcl12P40224 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cxcl12P40224 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cxcl12P40224 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cxcl12P40224 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Cxcl12P40224 Gm24935-201ENSMUST00000103770 110 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Gm15058-201ENSMUST00000117689 458 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Gm24939-201ENSMUST00000158325 137 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 Gm26404-201ENSMUST00000158498 109 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 Gm44370-201ENSMUST00000175436 112 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cxcl12P40224 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.9□□□□□ -1.63
Cxcl12P40224 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Gm26165-201ENSMUST00000083791 138 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cxcl12P40224 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.9□□□□□ -1.63
Cxcl12P40224 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cxcl12P40224 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cxcl12P40224 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cxcl12P40224 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm26075-201ENSMUST00000104062 121 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm11409-201ENSMUST00000118621 403 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm11761-201ENSMUST00000121392 445 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm15038-201ENSMUST00000122144 296 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm23228-201ENSMUST00000157296 270 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm20940-201ENSMUST00000197308 360 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms