Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm22444-201ENSMUST00000093693 108 ntBASIC5.51□□□□□ -1.53
LdlrP35951 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.51□□□□□ -1.53
LdlrP35951 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.51□□□□□ -1.53
LdlrP35951 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LdlrP35951 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LdlrP35951 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
LdlrP35951 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
LdlrP35951 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LdlrP35951 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LdlrP35951 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LdlrP35951 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LdlrP35951 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LdlrP35951 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.5□□□□□ -1.53
LdlrP35951 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.5□□□□□ -1.53
LdlrP35951 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.5□□□□□ -1.53
LdlrP35951 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm7079-201ENSMUST00000119726 171 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm11804-201ENSMUST00000121663 468 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.5□□□□□ -1.53
LdlrP35951 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Gm24465-201ENSMUST00000178398 107 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm6113-201ENSMUST00000180319 639 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm27942-201ENSMUST00000184669 101 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm27355-201ENSMUST00000185045 128 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm27781-201ENSMUST00000185185 92 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm29534-201ENSMUST00000187328 382 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm20561-201ENSMUST00000188131 292 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Ighv1-41-201ENSMUST00000194414 329 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.5□□□□□ -1.53
LdlrP35951 Gm42625-201ENSMUST00000198611 922 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm6520-201ENSMUST00000200636 410 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm42961-201ENSMUST00000202023 181 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.5□□□□□ -1.53
LdlrP35951 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.5□□□□□ -1.53
LdlrP35951 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.5□□□□□ -1.53
LdlrP35951 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.5□□□□□ -1.53
LdlrP35951 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LdlrP35951 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LdlrP35951 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LdlrP35951 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.5□□□□□ -1.53
LdlrP35951 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LdlrP35951 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LdlrP35951 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
LdlrP35951 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.5□□□□□ -1.53
LdlrP35951 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LdlrP35951 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LdlrP35951 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LdlrP35951 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
LdlrP35951 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LdlrP35951 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.49□□□□□ -1.53
LdlrP35951 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LdlrP35951 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LdlrP35951 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LdlrP35951 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LdlrP35951 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
LdlrP35951 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LdlrP35951 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LdlrP35951 Gm11774-201ENSMUST00000118601 293 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm13887-201ENSMUST00000119009 344 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm12281-201ENSMUST00000119536 298 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm12044-201ENSMUST00000120335 213 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm8545-201ENSMUST00000120692 801 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm3835-201ENSMUST00000120752 403 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm12770-201ENSMUST00000121734 462 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Gm13024-201ENSMUST00000121756 718 ntBASIC5.49□□□□□ -1.53
LdlrP35951 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.49□□□□□ -1.53
LdlrP35951 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms