Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.29□□□□□ -1.56
Col2a1P28481 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.29□□□□□ -1.56
Col2a1P28481 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.29□□□□□ -1.56
Col2a1P28481 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Col2a1P28481 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col2a1P28481 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Gm14610-201ENSMUST00000118358 966 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Gm14688-201ENSMUST00000119169 303 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Gm15981-201ENSMUST00000119196 457 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Gm8051-201ENSMUST00000120464 466 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Gm14784-201ENSMUST00000121604 663 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Gm22204-201ENSMUST00000122654 327 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col2a1P28481 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.28□□□□□ -1.56
Col2a1P28481 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col2a1P28481 Mir3620-201ENSMUST00000184710 61 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col2a1P28481 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col2a1P28481 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Gm45359-201ENSMUST00000210635 427 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 AC134860.6-201ENSMUST00000226038 285 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Gm23875-201ENSMUST00000083711 318 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col2a1P28481 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col2a1P28481 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col2a1P28481 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col2a1P28481 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col2a1P28481 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.28□□□□□ -1.56
Col2a1P28481 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Col2a1P28481 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Col2a1P28481 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
Col2a1P28481 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col2a1P28481 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Gm10444-201ENSMUST00000126708 148 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Gm22211-201ENSMUST00000158097 156 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Gm24939-201ENSMUST00000158325 137 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Gm19807-201ENSMUST00000173971 667 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Gm20673-201ENSMUST00000177167 430 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Gm21070-201ENSMUST00000182425 985 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col2a1P28481 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col2a1P28481 Gm25818-201ENSMUST00000083282 164 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col2a1P28481 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col2a1P28481 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col2a1P28481 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col2a1P28481 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.27□□□□□ -1.57
Col2a1P28481 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col2a1P28481 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col2a1P28481 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.27□□□□□ -1.57
Col2a1P28481 Mir761-201ENSMUST00000103245 76 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Gm10936-201ENSMUST00000105264 252 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col2a1P28481 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.26□□□□□ -1.57
Col2a1P28481 Gm24239-201ENSMUST00000157791 255 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Gm27940-201ENSMUST00000184449 98 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col2a1P28481 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col2a1P28481 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.26□□□□□ -1.57
Col2a1P28481 Gm17811-201ENSMUST00000206193 387 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col2a1P28481 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col2a1P28481 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col2a1P28481 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Col2a1P28481 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col2a1P28481 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col2a1P28481 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col2a1P28481 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Col2a1P28481 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col2a1P28481 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col2a1P28481 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col2a1P28481 Gm26367-201ENSMUST00000104165 132 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Gm15603-201ENSMUST00000119252 492 ntBASIC5.26□□□□□ -1.57
Col2a1P28481 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms