Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25208-201ENSMUST00000178964 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm24567-201ENSMUST00000179294 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm23943-201ENSMUST00000179712 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm25228-201ENSMUST00000180121 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm23304-201ENSMUST00000180209 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm28614-201ENSMUST00000186483 458 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm6074-201ENSMUST00000193340 451 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm18747-201ENSMUST00000198129 648 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Ighv1-83-201ENSMUST00000199643 351 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm18467-201ENSMUST00000208805 434 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm45485-201ENSMUST00000211229 357 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 AC159819.1-201ENSMUST00000213911 328 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC3.89□□□□□ -1.79
Sdc1P18828 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC3.89□□□□□ -1.79
Sdc1P18828 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 AC133517.2-201ENSMUST00000226820 690 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 AC161269.1-201ENSMUST00000228426 318 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sdc1P18828 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sdc1P18828 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sdc1P18828 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm24319-201ENSMUST00000083389 107 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm26163-201ENSMUST00000083792 178 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm29084-201ENSMUST00000185587 1452 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm44822-201ENSMUST00000208559 6389 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Sdc1P18828 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm5925-201ENSMUST00000105016 1497 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm37174-201ENSMUST00000194699 3058 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Sdc1P18828 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Sdc1P18828 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Sdc1P18828 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm25917-201ENSMUST00000104267 130 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 n-R5s172-201ENSMUST00000104508 114 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Sdc1P18828 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm13386-201ENSMUST00000117677 124 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm15357-201ENSMUST00000119160 285 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm25447-201ENSMUST00000158997 128 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm3030-201ENSMUST00000163410 516 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm3339-201ENSMUST00000163462 475 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm27512-201ENSMUST00000175328 126 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm20657-201ENSMUST00000177079 515 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm19560-201ENSMUST00000177510 514 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Sdc1P18828 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm27315-201ENSMUST00000183977 154 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm3496-201ENSMUST00000188283 745 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm38030-201ENSMUST00000192376 475 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm37308-201ENSMUST00000194684 100 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm19060-201ENSMUST00000201959 421 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm2691-201ENSMUST00000203205 901 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm44972-201ENSMUST00000206419 406 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm18193-201ENSMUST00000210017 772 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Gm8748-201ENSMUST00000211125 587 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms