Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm23879-201ENSMUST00000116874 126 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm13250-201ENSMUST00000117209 753 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm14516-201ENSMUST00000120012 252 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm13149-201ENSMUST00000122071 339 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm16259-201ENSMUST00000145241 553 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm26310-201ENSMUST00000157766 117 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm9499-201ENSMUST00000180888 964 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Mir6344-201ENSMUST00000183462 104 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm29484-201ENSMUST00000186067 324 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm29332-201ENSMUST00000190829 227 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm42458-201ENSMUST00000201914 369 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm32308-201ENSMUST00000203053 280 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm43974-201ENSMUST00000205080 684 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm2607-201ENSMUST00000212389 627 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm3086-202ENSMUST00000221248 310 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.16□□□□□ -1.58
Chmp6P0C0A3 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Chmp6P0C0A3 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Chmp6P0C0A3 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Chmp6P0C0A3 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Chmp6P0C0A3 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Chmp6P0C0A3 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Chmp6P0C0A3 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Chmp6P0C0A3 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Chmp6P0C0A3 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.15□□□□□ -1.58
Chmp6P0C0A3 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm11781-201ENSMUST00000118328 472 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm11631-201ENSMUST00000119220 156 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm12287-201ENSMUST00000119770 707 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm13867-201ENSMUST00000120844 395 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm22383-201ENSMUST00000158188 327 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm21241-201ENSMUST00000179551 934 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm20819-201ENSMUST00000191091 925 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm20871-201ENSMUST00000191322 931 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm2142-201ENSMUST00000197899 589 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm4574-201ENSMUST00000207804 542 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm5457-201ENSMUST00000022260 333 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms