Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm5215-201ENSMUST00000054380 405 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm38125-201ENSMUST00000194136 3438 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Hmgb3O54879 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm23692-201ENSMUST00000101881 160 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm14875-201ENSMUST00000120881 319 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm12936-201ENSMUST00000121439 301 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm5777-201ENSMUST00000177265 448 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm8221-201ENSMUST00000178052 564 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm9320-201ENSMUST00000184151 473 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm37272-201ENSMUST00000193401 488 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm7721-201ENSMUST00000200446 546 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm17811-201ENSMUST00000206193 387 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm18924-201ENSMUST00000211929 316 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 AC123944.2-201ENSMUST00000215290 382 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 CT025579.3-201ENSMUST00000224543 451 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 AC131100.2-201ENSMUST00000227701 998 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm23972-201ENSMUST00000083322 165 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 n-R5s46-201ENSMUST00000083960 116 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.77□□□□□ -1.81
Hmgb3O54879 AC187103.2-201ENSMUST00000223605 1617 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.77□□□□□ -1.81
Hmgb3O54879 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
Hmgb3O54879 AC103672.3-201ENSMUST00000227649 3243 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm25418-201ENSMUST00000104214 129 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm15531-201ENSMUST00000118062 252 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm13755-201ENSMUST00000118509 305 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm14335-201ENSMUST00000119165 810 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm11507-201ENSMUST00000156462 412 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm26373-201ENSMUST00000157833 103 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm24435-201ENSMUST00000157886 110 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm22923-201ENSMUST00000174952 110 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm3145-201ENSMUST00000188584 220 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC3.76□□□□□ -1.81
Hmgb3O54879 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC3.76□□□□□ -1.81
Hmgb3O54879 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms