Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm17967-201ENSMUST00000195319 647 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Npc1O35604 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.08□□□□□ -1.6
Npc1O35604 Gm42976-201ENSMUST00000200313 222 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Trav12-4-201ENSMUST00000200663 271 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Gm31520-201ENSMUST00000203048 733 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Gm19761-201ENSMUST00000205372 391 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Gm44776-201ENSMUST00000207212 381 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.08□□□□□ -1.6
Npc1O35604 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.08□□□□□ -1.6
Npc1O35604 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Npc1O35604 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Npc1O35604 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Npc1O35604 Gm23927-201ENSMUST00000082466 215 ntBASIC5.08□□□□□ -1.6
Npc1O35604 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Npc1O35604 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Npc1O35604 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Npc1O35604 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Npc1O35604 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Npc1O35604 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Npc1O35604 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Npc1O35604 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Npc1O35604 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.08□□□□□ -1.6
Npc1O35604 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Npc1O35604 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Npc1O35604 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Npc1O35604 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.07□□□□□ -1.6
Npc1O35604 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Npc1O35604 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm23274-201ENSMUST00000104056 130 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm24170-201ENSMUST00000104124 133 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Npc1O35604 Mir1188-201ENSMUST00000116756 120 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm16394-201ENSMUST00000117289 675 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm11550-201ENSMUST00000118210 699 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm14046-201ENSMUST00000119389 509 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.07□□□□□ -1.6
Npc1O35604 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm8358-201ENSMUST00000167222 555 ntBASIC5.07□□□□□ -1.6
Npc1O35604 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Npc1O35604 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm19206-201ENSMUST00000186401 827 ntBASIC5.07□□□□□ -1.6
Npc1O35604 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm43476-201ENSMUST00000197873 405 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm42796-201ENSMUST00000199913 1087 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.07□□□□□ -1.6
Npc1O35604 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Npc1O35604 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.07□□□□□ -1.6
Npc1O35604 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm9386-201ENSMUST00000095195 381 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Npc1O35604 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.07□□□□□ -1.6
Npc1O35604 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.07□□□□□ -1.6
Npc1O35604 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.07□□□□□ -1.6
Npc1O35604 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.07□□□□□ -1.6
Npc1O35604 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.06□□□□□ -1.6
Npc1O35604 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Npc1O35604 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.06□□□□□ -1.6
Npc1O35604 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Npc1O35604 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Npc1O35604 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Npc1O35604 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.06□□□□□ -1.6
Npc1O35604 Gm25313-201ENSMUST00000101817 116 ntBASIC5.06□□□□□ -1.6
Npc1O35604 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Npc1O35604 Gm15493-201ENSMUST00000119461 528 ntBASIC5.06□□□□□ -1.6
Npc1O35604 Gm13077-201ENSMUST00000121941 484 ntBASIC5.06□□□□□ -1.6
Npc1O35604 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.06□□□□□ -1.6
Npc1O35604 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Npc1O35604 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.06□□□□□ -1.6
Npc1O35604 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC5.06□□□□□ -1.6
Npc1O35604 Gm25389-201ENSMUST00000157340 286 ntBASIC5.06□□□□□ -1.6
Npc1O35604 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Npc1O35604 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Npc1O35604 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms