Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm5182-201ENSMUST00000217708 6092 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm26991-201ENSMUST00000180950 620 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm43157-201ENSMUST00000198223 412 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 AC158605.3-201ENSMUST00000218999 2538 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm14086-201ENSMUST00000117152 173 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm5379-201ENSMUST00000120973 826 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm23855-201ENSMUST00000158377 135 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm44092-201ENSMUST00000204470 258 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm6991-201ENSMUST00000218475 1178 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm45424-201ENSMUST00000210575 3300 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm25481-201ENSMUST00000083221 158 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm24118-201ENSMUST00000103972 126 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm24175-201ENSMUST00000158931 129 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm7837-201ENSMUST00000190873 412 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm18429-201ENSMUST00000198707 421 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm42994-201ENSMUST00000195964 2549 ntBASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a3E9PWQ3 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm22498-201ENSMUST00000104497 86 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm6969-201ENSMUST00000140065 342 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm8993-201ENSMUST00000182182 983 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm42926-201ENSMUST00000200496 697 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm32381-201ENSMUST00000203192 476 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 AC133203.2-201ENSMUST00000226709 464 ntBASIC4.5□□□□□ -1.69
Col6a3E9PWQ3 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms