Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm1866-201ENSMUST00000120701 477 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm12041-201ENSMUST00000121606 602 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm24939-201ENSMUST00000158325 137 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm18183-201ENSMUST00000191024 615 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col4a6B1AVK5 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col4a6B1AVK5 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Gm6177-201ENSMUST00000085589 465 ntBASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col4a6B1AVK5 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm26367-201ENSMUST00000104165 132 ntBASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm15745-201ENSMUST00000119807 115 ntBASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm23391-201ENSMUST00000157579 104 ntBASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm26005-201ENSMUST00000158802 134 ntBASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.85□□□□□ -1.63
Col4a6B1AVK5 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm37023-201ENSMUST00000192895 2426 ntBASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col4a6B1AVK5 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm12486-201ENSMUST00000120887 541 ntBASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm23781-201ENSMUST00000157940 308 ntBASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm28654-201ENSMUST00000189801 379 ntBASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm18547-201ENSMUST00000192439 811 ntBASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.84□□□□□ -1.63
Col4a6B1AVK5 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.84□□□□□ -1.64
Col4a6B1AVK5 AC158981.2-201ENSMUST00000227565 1537 ntBASIC4.84□□□□□ -1.64
Col4a6B1AVK5 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
Col4a6B1AVK5 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm37541-201ENSMUST00000192464 2315 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm10444-201ENSMUST00000126708 148 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm23082-201ENSMUST00000157852 133 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm9294-201ENSMUST00000165198 789 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm26219-201ENSMUST00000175216 71 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm43710-201ENSMUST00000199583 452 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm4045-201ENSMUST00000204076 310 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm46190-201ENSMUST00000219650 427 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm17137-201ENSMUST00000164106 4371 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col4a6B1AVK5 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms