Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.81□□□□□ -1.64
Scn1aA2APX8 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm12112-201ENSMUST00000117772 231 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm21850-201ENSMUST00000179792 359 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm37881-201ENSMUST00000193001 421 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm9238-201ENSMUST00000196181 329 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm4734-201ENSMUST00000200117 777 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm22326-201ENSMUST00000158897 351 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm13249-201ENSMUST00000177803 345 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm13144-201ENSMUST00000179385 345 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm37560-201ENSMUST00000194289 1000 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm44463-201ENSMUST00000198895 137 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn1aA2APX8 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scn1aA2APX8 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.8□□□□□ -1.64
Scn1aA2APX8 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Mir879-201ENSMUST00000104703 76 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm25290-201ENSMUST00000122796 144 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm17811-201ENSMUST00000206193 387 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm37911-201ENSMUST00000193099 1545 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm10444-201ENSMUST00000126708 148 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm3077-201ENSMUST00000165903 627 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Gm19134-201ENSMUST00000221203 487 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 AC163631.1-201ENSMUST00000225041 598 ntBASIC4.79□□□□□ -1.64
Scn1aA2APX8 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn1aA2APX8 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn1aA2APX8 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn1aA2APX8 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn1aA2APX8 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn1aA2APX8 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC4.78□□□□□ -1.64
Scn1aA2APX8 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn1aA2APX8 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms