Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm22778-201ENSMUST00000104090 128 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm15390-201ENSMUST00000120323 738 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm13484-201ENSMUST00000120738 412 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm5353-201ENSMUST00000139800 793 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm28957-201ENSMUST00000190174 373 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm9442-201ENSMUST00000194242 319 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm6057-201ENSMUST00000195927 314 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm6261-201ENSMUST00000204707 760 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm29785-201ENSMUST00000217033 383 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm16149-201ENSMUST00000117631 309 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm11409-201ENSMUST00000118621 403 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm15357-201ENSMUST00000119160 285 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm11790-201ENSMUST00000119569 455 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm24371-201ENSMUST00000122662 267 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm26354-201ENSMUST00000158221 129 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm22254-201ENSMUST00000179186 110 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm27636-201ENSMUST00000184528 122 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm21139-201ENSMUST00000186594 877 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm9687-201ENSMUST00000189312 602 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm5842-201ENSMUST00000195073 622 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm8861-201ENSMUST00000196346 832 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm20239-201ENSMUST00000196610 982 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm34224-201ENSMUST00000204606 364 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm18997-201ENSMUST00000216353 822 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm9512-201ENSMUST00000223112 497 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm26226-201ENSMUST00000082509 116 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm25134-201ENSMUST00000082646 160 ntBASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms