Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm15076-201ENSMUST00000117076 474 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm15312-201ENSMUST00000118827 271 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm15309-201ENSMUST00000121644 240 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm12494-201ENSMUST00000121684 521 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm13531-201ENSMUST00000121893 543 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm25439-201ENSMUST00000158280 131 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm25944-201ENSMUST00000178758 94 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm43015-201ENSMUST00000199087 565 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm44316-201ENSMUST00000199274 97 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm19900-201ENSMUST00000207285 576 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm18774-201ENSMUST00000218269 601 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm19116-201ENSMUST00000218592 642 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm7240-201ENSMUST00000220769 664 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm46312-201ENSMUST00000220961 420 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm3785-201ENSMUST00000221000 202 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm18413-201ENSMUST00000221573 655 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 mt-Tr-201ENSMUST00000082412 68 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm24200-201ENSMUST00000082955 157 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm23502-201ENSMUST00000083902 145 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.56□□□□□ -1.52
Ndc1Q8VCB1 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm4234-201ENSMUST00000119747 714 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm14411-201ENSMUST00000121798 914 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm24731-201ENSMUST00000158227 131 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm24939-201ENSMUST00000158325 137 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm22158-201ENSMUST00000158411 126 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm24734-201ENSMUST00000158860 262 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm3141-201ENSMUST00000168726 499 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm22857-201ENSMUST00000174969 134 ntBASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ndc1Q8VCB1 Gm27024-201ENSMUST00000182561 755 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms