Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm15531-201ENSMUST00000118062 252 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Mup-ps16-201ENSMUST00000120085 596 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm25553-201ENSMUST00000158076 79 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm26169-201ENSMUST00000158420 135 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm23450-201ENSMUST00000178285 91 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm28186-201ENSMUST00000187447 679 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm18348-201ENSMUST00000191227 820 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm42652-201ENSMUST00000199073 614 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm6177-201ENSMUST00000085589 465 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm14861-201ENSMUST00000119451 455 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm13867-201ENSMUST00000120844 395 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm6027-201ENSMUST00000121467 756 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm23225-201ENSMUST00000158121 114 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm24860-201ENSMUST00000158457 276 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm19427-201ENSMUST00000183619 208 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm6075-201ENSMUST00000186816 486 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm20056-201ENSMUST00000194813 519 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Lsm1Q8VC85 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm10241-201ENSMUST00000117664 286 ntBASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm16106-201ENSMUST00000119187 294 ntBASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm23960-201ENSMUST00000157206 131 ntBASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm23082-201ENSMUST00000157852 133 ntBASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm20401-201ENSMUST00000173717 212 ntBASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm29509-201ENSMUST00000185716 321 ntBASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm29159-201ENSMUST00000187969 379 ntBASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.62□□□□□ -1.67
Lsm1Q8VC85 Gm44648-201ENSMUST00000208267 329 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms