Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm8724-201ENSMUST00000081668 483 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Mir467h-201ENSMUST00000116759 121 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm25507-201ENSMUST00000116981 144 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm14725-201ENSMUST00000120324 828 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Mir5125-201ENSMUST00000175240 79 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm24303-201ENSMUST00000178237 126 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm23269-201ENSMUST00000178701 107 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm27006-201ENSMUST00000182218 943 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm37719-201ENSMUST00000194615 292 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm42776-201ENSMUST00000198031 406 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm2314-201ENSMUST00000200391 586 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm7890-201ENSMUST00000204877 601 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm5735-201ENSMUST00000207053 167 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm45070-201ENSMUST00000208100 246 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Gm6171-201ENSMUST00000220760 645 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.4□□□□□ -1.54
Clrn1Q8K445 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Clrn1Q8K445 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.4□□□□□ -1.55
Clrn1Q8K445 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Clrn1Q8K445 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Clrn1Q8K445 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Clrn1Q8K445 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.4□□□□□ -1.55
Clrn1Q8K445 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Clrn1Q8K445 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Clrn1Q8K445 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Clrn1Q8K445 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm8545-201ENSMUST00000120692 801 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm11848-201ENSMUST00000121207 973 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm13131-201ENSMUST00000122228 321 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms