Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm26144-201ENSMUST00000104475 132 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15603-201ENSMUST00000119252 492 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15267-201ENSMUST00000120888 464 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm11677-201ENSMUST00000121349 977 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm14649-201ENSMUST00000121814 324 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm22514-201ENSMUST00000122547 308 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm22343-201ENSMUST00000122648 286 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm22600-201ENSMUST00000157598 269 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm7281-201ENSMUST00000160010 543 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm5258-201ENSMUST00000165437 327 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm25037-201ENSMUST00000175418 110 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm25246-201ENSMUST00000175476 69 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Mir6539-201ENSMUST00000183732 110 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm27460-201ENSMUST00000184213 100 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm44779-201ENSMUST00000206937 708 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm46191-201ENSMUST00000218899 433 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 AC123658.1-201ENSMUST00000228364 867 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm5045-201ENSMUST00000027054 810 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm22684-201ENSMUST00000082849 132 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm26163-201ENSMUST00000083792 178 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm6177-201ENSMUST00000085589 465 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm24429-201ENSMUST00000104076 132 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15357-201ENSMUST00000119160 285 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15803-201ENSMUST00000120118 394 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15959-201ENSMUST00000121724 368 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm23897-201ENSMUST00000158110 158 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm24295-201ENSMUST00000158298 131 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm24931-201ENSMUST00000158324 107 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm23633-201ENSMUST00000175293 119 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm9499-201ENSMUST00000180888 964 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm37203-201ENSMUST00000191618 385 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm43765-201ENSMUST00000196303 893 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28bQ8CEG5 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms