Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.68□□□□□ -1.5
Atg4aQ8C9S8 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.68□□□□□ -1.5
Atg4aQ8C9S8 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Atg4aQ8C9S8 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Atg4aQ8C9S8 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm12507-201ENSMUST00000119155 415 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm22819-201ENSMUST00000157445 303 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm37961-201ENSMUST00000192729 299 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm37272-201ENSMUST00000193401 488 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm17811-201ENSMUST00000206193 387 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm3338-201ENSMUST00000220982 269 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.67□□□□□ -1.5
Atg4aQ8C9S8 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm26376-201ENSMUST00000104784 110 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm12189-201ENSMUST00000119779 912 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm12685-201ENSMUST00000121702 214 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm13149-201ENSMUST00000122071 339 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm5353-201ENSMUST00000139800 793 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm27165-201ENSMUST00000183951 232 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm5734-201ENSMUST00000189787 913 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm37881-201ENSMUST00000193001 421 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm43309-201ENSMUST00000200837 458 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 AC080021.1-201ENSMUST00000228104 700 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Atg4aQ8C9S8 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm16128-201ENSMUST00000117855 626 ntBASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm11909-201ENSMUST00000121424 759 ntBASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm16260-201ENSMUST00000155141 304 ntBASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm24251-201ENSMUST00000157324 114 ntBASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm26310-201ENSMUST00000157766 117 ntBASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm9499-201ENSMUST00000180888 964 ntBASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.65□□□□□ -1.5
Atg4aQ8C9S8 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms