Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Gm32300-201ENSMUST00000221735 515 ntBASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Nsa2-203ENSMUST00000225410 974 ntBASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim9Q8C7M3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm8424-201ENSMUST00000117716 988 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm13172-201ENSMUST00000118685 256 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm27315-201ENSMUST00000183977 154 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm27818-201ENSMUST00000184536 159 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm18356-201ENSMUST00000185677 623 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm6680-201ENSMUST00000192789 950 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm2147-201ENSMUST00000193588 639 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm8023-201ENSMUST00000195298 903 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm43005-201ENSMUST00000199015 648 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm18468-201ENSMUST00000207321 369 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm18470-201ENSMUST00000207467 420 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm18465-201ENSMUST00000207468 369 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm18464-201ENSMUST00000207803 420 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm18458-201ENSMUST00000207908 369 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm18461-201ENSMUST00000208421 420 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 AC154552.5-201ENSMUST00000222352 207 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 AC133654.1-201ENSMUST00000228411 672 ntBASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim9Q8C7M3 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Fbxw23-202ENSMUST00000198480 1388 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm11481-201ENSMUST00000120069 255 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm14601-201ENSMUST00000120892 236 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm15077-201ENSMUST00000122344 362 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm26925-201ENSMUST00000182470 957 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm28648-201ENSMUST00000190092 343 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm8891-201ENSMUST00000198546 832 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm18215-201ENSMUST00000204429 798 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Desi2-202ENSMUST00000069568 1193 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Gm23459-201ENSMUST00000083259 131 ntBASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms