Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Snora35-201ENSMUST00000104579 128 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm22208-201ENSMUST00000122658 110 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm20519-201ENSMUST00000173684 359 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm18667-201ENSMUST00000186523 484 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm7626-201ENSMUST00000195801 353 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm43655-201ENSMUST00000197367 222 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm43233-201ENSMUST00000200491 616 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 AC134333.1-201ENSMUST00000204536 944 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm45485-201ENSMUST00000211229 357 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 AC132437.1-201ENSMUST00000218308 320 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Mir3068-201ENSMUST00000083004 136 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Defa-ps18-201ENSMUST00000098889 371 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm20287-201ENSMUST00000172848 2367 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm14912-201ENSMUST00000120166 1773 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm42967-201ENSMUST00000198647 2312 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 AU020206-202ENSMUST00000206358 3009 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm23578-201ENSMUST00000103943 104 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm26396-201ENSMUST00000104093 132 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm13400-201ENSMUST00000117436 380 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm12677-201ENSMUST00000118668 426 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm12244-201ENSMUST00000119500 291 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm5924-201ENSMUST00000132554 871 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm24236-201ENSMUST00000157794 134 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm22701-201ENSMUST00000175371 291 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm26177-201ENSMUST00000178683 107 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm37743-201ENSMUST00000194645 376 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Mir3970-201ENSMUST00000199287 90 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm43116-201ENSMUST00000199789 195 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm45514-201ENSMUST00000211531 689 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 n-R5s37-201ENSMUST00000082533 118 ntBASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim47Q8C0E3 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms