Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ubfd1Q78JW9 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm7171-201ENSMUST00000177413 1349 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm14932-201ENSMUST00000117112 453 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm15385-201ENSMUST00000118725 667 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm8358-201ENSMUST00000167222 555 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm24080-201ENSMUST00000175178 232 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm8941-201ENSMUST00000181451 899 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm29086-201ENSMUST00000186774 222 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm29085-201ENSMUST00000187108 225 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm37987-201ENSMUST00000194999 825 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm43493-201ENSMUST00000199837 202 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm43368-201ENSMUST00000200638 409 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm19134-201ENSMUST00000221203 487 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 AC192616.1-201ENSMUST00000221922 132 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm23628-201ENSMUST00000082464 173 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.27□□□□□ -1.57
Ubfd1Q78JW9 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm24860-201ENSMUST00000158457 276 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm22261-201ENSMUST00000158691 324 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm8256-201ENSMUST00000169178 453 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm27037-201ENSMUST00000182270 960 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm29596-201ENSMUST00000185710 385 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm28967-201ENSMUST00000187351 281 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm21006-201ENSMUST00000196930 667 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm43004-201ENSMUST00000201872 703 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm45215-201ENSMUST00000206407 395 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm45660-201ENSMUST00000210267 151 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm6049-201ENSMUST00000222369 458 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Zfp429-203ENSMUST00000224684 524 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm25187-201ENSMUST00000083906 133 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms