Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm9071-201ENSMUST00000165915 474 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm43516-201ENSMUST00000196891 322 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm43945-201ENSMUST00000203595 754 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 AC134333.1-201ENSMUST00000204536 944 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm45127-201ENSMUST00000205984 1015 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm10356-201ENSMUST00000097152 1258 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm14324-201ENSMUST00000121358 3051 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm37106-201ENSMUST00000193760 1532 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Clcn1Q64347 AC125328.1-201ENSMUST00000226812 2265 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Clcn1Q64347 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Clcn1Q64347 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm11352-201ENSMUST00000119264 517 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm13788-201ENSMUST00000120767 601 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Magea9-ps-201ENSMUST00000140655 732 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Magea9-ps-202ENSMUST00000167328 899 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm26746-201ENSMUST00000181722 487 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm28257-201ENSMUST00000185244 463 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm45070-201ENSMUST00000208100 246 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC8.09□□□□□ -1.11
Clcn1Q64347 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC8.09□□□□□ -1.11
Clcn1Q64347 AC115793.1-201ENSMUST00000216605 215 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 AC101677.1-201ENSMUST00000218590 158 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 AC153943.1-201ENSMUST00000219312 256 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC8.09□□□□□ -1.11
Clcn1Q64347 AV026068-231ENSMUST00000225862 482 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clcn1Q64347 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
Clcn1Q64347 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC8.09□□□□□ -1.11
Clcn1Q64347 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clcn1Q64347 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clcn1Q64347 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clcn1Q64347 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clcn1Q64347 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clcn1Q64347 AC160029.1-201ENSMUST00000219628 2678 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Gm5925-201ENSMUST00000105016 1497 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clcn1Q64347 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clcn1Q64347 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clcn1Q64347 Gm11972-201ENSMUST00000118514 389 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 Gm7931-201ENSMUST00000121537 271 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clcn1Q64347 Gm24719-201ENSMUST00000157520 110 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 Gm22599-201ENSMUST00000157597 132 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 Gm24550-201ENSMUST00000158648 279 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clcn1Q64347 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clcn1Q64347 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC8.08□□□□□ -1.12
Clcn1Q64347 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms