Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Mir700-201ENSMUST00000102169 79 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm15531-201ENSMUST00000118062 252 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm14267-201ENSMUST00000119751 496 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm12340-201ENSMUST00000121617 462 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Llph-ps2-201ENSMUST00000122000 393 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm9071-201ENSMUST00000165915 474 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm24957-201ENSMUST00000179604 132 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm29376-201ENSMUST00000189357 835 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm37996-201ENSMUST00000191859 367 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm17988-201ENSMUST00000208796 535 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm2996-201ENSMUST00000211398 537 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm7802-201ENSMUST00000216464 262 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 AC107711.2-203ENSMUST00000227827 762 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm24042-201ENSMUST00000083114 103 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm38142-201ENSMUST00000194093 3555 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 AL670757.1-201ENSMUST00000223668 1959 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm37903-201ENSMUST00000192122 2381 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm15332-201ENSMUST00000118386 357 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm13603-201ENSMUST00000119404 83 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm12607-201ENSMUST00000120724 493 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm20561-201ENSMUST00000188131 292 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm28951-201ENSMUST00000190742 313 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm7045-201ENSMUST00000221466 605 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm16335-201ENSMUST00000077495 309 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 AC124414.1-201ENSMUST00000218033 2946 ntBASIC11.1□□□□□ -0.63
Trim41Q5NCC3 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Trim41Q5NCC3 Gm42540-201ENSMUST00000200319 2008 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm44186-201ENSMUST00000204118 2752 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm13887-201ENSMUST00000119009 344 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm8761-201ENSMUST00000121507 955 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Mup-ps2-201ENSMUST00000142602 533 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm22724-201ENSMUST00000158091 127 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm23408-201ENSMUST00000158523 265 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm22420-201ENSMUST00000178795 126 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm28017-201ENSMUST00000183434 126 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm27428-201ENSMUST00000184289 110 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm7780-201ENSMUST00000214787 406 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm20304-201ENSMUST00000218168 444 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm9202-201ENSMUST00000223036 437 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm24454-201ENSMUST00000083349 132 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm24764-201ENSMUST00000083686 199 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm44661-201ENSMUST00000208830 3503 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm38077-201ENSMUST00000193657 3245 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm37864-201ENSMUST00000195308 3075 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 AC144772.2-201ENSMUST00000228830 2859 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms