Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm22020-201ENSMUST00000104358 136 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm15766-201ENSMUST00000118025 813 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm8129-201ENSMUST00000118230 213 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm9208-201ENSMUST00000120468 948 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm13430-201ENSMUST00000121366 288 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm22819-201ENSMUST00000157445 303 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm22529-201ENSMUST00000158817 123 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm19206-201ENSMUST00000186401 827 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm37355-201ENSMUST00000193345 606 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm43309-201ENSMUST00000200837 458 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3bQ3ULL6 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm23746-201ENSMUST00000104229 125 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm23879-201ENSMUST00000116874 126 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm12731-201ENSMUST00000120932 268 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm43524-201ENSMUST00000197278 298 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm44431-201ENSMUST00000203500 413 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Gm18997-201ENSMUST00000216353 822 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Snora52-201ENSMUST00000082732 137 ntBASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Upf3bQ3ULL6 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm24117-201ENSMUST00000103973 133 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm24124-201ENSMUST00000104103 132 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm7840-201ENSMUST00000122086 533 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm22958-201ENSMUST00000122512 184 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm22155-201ENSMUST00000083836 162 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm6177-201ENSMUST00000085589 465 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.04□□□□□ -1.6
Upf3bQ3ULL6 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms