Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox9Q04887 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox9Q04887 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox9Q04887 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox9Q04887 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox9Q04887 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox9Q04887 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.96□□□□□ -1.46
Sox9Q04887 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.96□□□□□ -1.46
Sox9Q04887 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.96□□□□□ -1.46
Sox9Q04887 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox9Q04887 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Sox9Q04887 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox9Q04887 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm15176-201ENSMUST00000117734 135 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm12873-201ENSMUST00000119988 422 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm15803-201ENSMUST00000120118 394 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm7309-201ENSMUST00000121670 581 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm25979-201ENSMUST00000157177 138 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm27522-201ENSMUST00000183949 230 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm27964-201ENSMUST00000185195 62 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm29598-201ENSMUST00000188996 588 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm18775-201ENSMUST00000190763 586 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm37838-201ENSMUST00000194464 312 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm43810-201ENSMUST00000201018 232 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm29817-201ENSMUST00000210098 172 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm36247-201ENSMUST00000211834 285 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm35558-202ENSMUST00000221819 499 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
Sox9Q04887 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 AC107453.2-201ENSMUST00000227714 655 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm4963-201ENSMUST00000072718 378 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox9Q04887 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox9Q04887 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.95□□□□□ -1.46
Sox9Q04887 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox9Q04887 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox9Q04887 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm24469-201ENSMUST00000104487 131 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm10936-201ENSMUST00000105264 252 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm14975-201ENSMUST00000118741 664 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm11759-201ENSMUST00000121742 464 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm25052-201ENSMUST00000122661 158 ntBASIC5.94□□□□□ -1.46
Sox9Q04887 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.94□□□□□ -1.46
Sox9Q04887 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms