Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm23014-201ENSMUST00000104144 130 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm14304-201ENSMUST00000117272 446 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm15333-201ENSMUST00000118825 364 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm4842-201ENSMUST00000183237 835 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Mir7022-201ENSMUST00000183749 61 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm18802-201ENSMUST00000186270 888 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm28195-201ENSMUST00000186992 372 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm8599-201ENSMUST00000193033 457 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm38011-201ENSMUST00000193312 279 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm37670-201ENSMUST00000193622 229 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm8891-201ENSMUST00000198546 832 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm18011-201ENSMUST00000203717 565 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm25134-201ENSMUST00000082646 160 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Snora52-201ENSMUST00000082732 137 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.19□□□□□ -1.74
Nkx3-1P97436 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nkx3-1P97436 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm12820-201ENSMUST00000119233 342 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm16463-201ENSMUST00000120527 721 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm12807-201ENSMUST00000121546 962 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm26098-201ENSMUST00000157247 288 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm18181-201ENSMUST00000190670 736 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm6988-201ENSMUST00000222676 375 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Nsa2-203ENSMUST00000225410 974 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 AC154484.2-201ENSMUST00000228359 818 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Nkx3-1P97436 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.18□□□□□ -1.74
Nkx3-1P97436 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Nkx3-1P97436 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms