Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC5.46□□□□□ -1.54
CiitaP79621 Gm44820-201ENSMUST00000207420 396 ntBASIC5.46□□□□□ -1.54
CiitaP79621 Gm3816-201ENSMUST00000209803 433 ntBASIC5.46□□□□□ -1.54
CiitaP79621 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.46□□□□□ -1.54
CiitaP79621 CT030254.3-201ENSMUST00000225959 1231 ntBASIC5.46□□□□□ -1.54
CiitaP79621 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
CiitaP79621 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CiitaP79621 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CiitaP79621 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CiitaP79621 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.46□□□□□ -1.54
CiitaP79621 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.46□□□□□ -1.54
CiitaP79621 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CiitaP79621 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.46□□□□□ -1.54
CiitaP79621 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CiitaP79621 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.46□□□□□ -1.54
CiitaP79621 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.46□□□□□ -1.54
CiitaP79621 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CiitaP79621 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CiitaP79621 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CiitaP79621 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CiitaP79621 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CiitaP79621 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.45□□□□□ -1.54
CiitaP79621 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Gm12683-201ENSMUST00000117528 415 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm11905-201ENSMUST00000117653 678 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm15772-201ENSMUST00000118533 438 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm13213-201ENSMUST00000119668 474 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm12287-201ENSMUST00000119770 707 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Gm26352-201ENSMUST00000158223 125 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CiitaP79621 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.45□□□□□ -1.54
CiitaP79621 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.45□□□□□ -1.54
CiitaP79621 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Gm9499-201ENSMUST00000180888 964 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Mir7056-201ENSMUST00000183776 59 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.45□□□□□ -1.54
CiitaP79621 Gm19086-201ENSMUST00000190772 665 ntBASIC5.45□□□□□ -1.54
CiitaP79621 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Gm43919-201ENSMUST00000204303 364 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.45□□□□□ -1.54
CiitaP79621 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CiitaP79621 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Gm23626-201ENSMUST00000082458 133 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm22220-201ENSMUST00000082671 149 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CiitaP79621 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CiitaP79621 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.45□□□□□ -1.54
CiitaP79621 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.44□□□□□ -1.54
CiitaP79621 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CiitaP79621 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.44□□□□□ -1.54
CiitaP79621 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CiitaP79621 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CiitaP79621 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.44□□□□□ -1.54
CiitaP79621 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CiitaP79621 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.44□□□□□ -1.54
CiitaP79621 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CiitaP79621 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.44□□□□□ -1.54
CiitaP79621 Gm24188-201ENSMUST00000157980 108 ntBASIC5.44□□□□□ -1.54
CiitaP79621 Gm23513-201ENSMUST00000158181 133 ntBASIC5.44□□□□□ -1.54
CiitaP79621 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CiitaP79621 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.44□□□□□ -1.54
CiitaP79621 V1rg10-201ENSMUST00000183378 937 ntBASIC5.44□□□□□ -1.54
CiitaP79621 Gm18177-201ENSMUST00000188373 404 ntBASIC5.44□□□□□ -1.54
CiitaP79621 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.44□□□□□ -1.54
CiitaP79621 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.44□□□□□ -1.54
CiitaP79621 Gm43136-201ENSMUST00000200403 636 ntBASIC5.44□□□□□ -1.54
CiitaP79621 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC5.44□□□□□ -1.54
CiitaP79621 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.44□□□□□ -1.54
CiitaP79621 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CiitaP79621 Gm6906-201ENSMUST00000218014 569 ntBASIC5.44□□□□□ -1.54
CiitaP79621 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CiitaP79621 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CiitaP79621 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CiitaP79621 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CiitaP79621 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CiitaP79621 Gm10794-201ENSMUST00000099624 207 ntBASIC5.44□□□□□ -1.54
CiitaP79621 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.44□□□□□ -1.54
CiitaP79621 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CiitaP79621 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CiitaP79621 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms