Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sox3P53784 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sox3P53784 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.71□□□□□ -1.65
Sox3P53784 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Sox3P53784 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.71□□□□□ -1.65
Sox3P53784 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Sox3P53784 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sox3P53784 Gm13567-201ENSMUST00000118026 247 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm14610-201ENSMUST00000118358 966 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm22204-201ENSMUST00000122654 327 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sox3P53784 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sox3P53784 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.71□□□□□ -1.66
Sox3P53784 Gm25348-201ENSMUST00000158961 111 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sox3P53784 Gm27564-201ENSMUST00000185196 96 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm28660-201ENSMUST00000186496 253 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm3145-201ENSMUST00000188584 220 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm8874-201ENSMUST00000196826 286 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm45236-201ENSMUST00000208632 229 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm45157-201ENSMUST00000208729 401 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Sox3P53784 AC166323.1-201ENSMUST00000217756 367 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Sox3P53784 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm5045-201ENSMUST00000027054 810 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sox3P53784 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sox3P53784 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sox3P53784 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sox3P53784 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sox3P53784 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.71□□□□□ -1.66
Sox3P53784 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Sox3P53784 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sox3P53784 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.71□□□□□ -1.66
Sox3P53784 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox3P53784 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox3P53784 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sox3P53784 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Sox3P53784 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox3P53784 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.7□□□□□ -1.66
Sox3P53784 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox3P53784 Gm7281-201ENSMUST00000160010 543 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox3P53784 Gm4842-201ENSMUST00000183237 835 ntBASIC4.7□□□□□ -1.66
Sox3P53784 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.7□□□□□ -1.66
Sox3P53784 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Gm42694-201ENSMUST00000196951 358 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Gm18011-201ENSMUST00000203717 565 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.7□□□□□ -1.66
Sox3P53784 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.7□□□□□ -1.66
Sox3P53784 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Sox3P53784 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox3P53784 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.7□□□□□ -1.66
Sox3P53784 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.7□□□□□ -1.66
Sox3P53784 AC123061.2-201ENSMUST00000226234 802 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Sox3P53784 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox3P53784 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox3P53784 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox3P53784 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox3P53784 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox3P53784 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox3P53784 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox3P53784 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.7□□□□□ -1.66
Sox3P53784 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox3P53784 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox3P53784 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox3P53784 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox3P53784 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox3P53784 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox3P53784 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Gm12285-201ENSMUST00000117347 233 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Gm13745-201ENSMUST00000121994 527 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.69□□□□□ -1.66
Sox3P53784 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.69□□□□□ -1.66
Sox3P53784 Gm24745-201ENSMUST00000157840 85 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Gm18128-201ENSMUST00000172625 511 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.69□□□□□ -1.66
Sox3P53784 Gm28871-201ENSMUST00000186191 687 ntBASIC4.69□□□□□ -1.66
Sox3P53784 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox3P53784 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox3P53784 Gm2623-201ENSMUST00000199229 286 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms