Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm13477-201ENSMUST00000121620 2687 ntBASIC7.15□□□□□ -1.26
Cux1P53564 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.15□□□□□ -1.26
Cux1P53564 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Cux1P53564 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Cux1P53564 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Cux1P53564 Gm10444-201ENSMUST00000126708 148 ntBASIC7.15□□□□□ -1.27
Cux1P53564 Gm37614-201ENSMUST00000195645 210 ntBASIC7.15□□□□□ -1.27
Cux1P53564 Gm45434-201ENSMUST00000210550 293 ntBASIC7.15□□□□□ -1.27
Cux1P53564 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Cux1P53564 AC132315.1-201ENSMUST00000221771 390 ntBASIC7.15□□□□□ -1.27
Cux1P53564 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Cux1P53564 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Cux1P53564 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Gm13058-201ENSMUST00000117097 1435 ntBASIC7.14□□□□□ -1.27
Cux1P53564 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Cux1P53564 Gm19113-201ENSMUST00000217552 1828 ntBASIC7.14□□□□□ -1.27
Cux1P53564 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC7.14□□□□□ -1.27
Cux1P53564 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Gm1866-201ENSMUST00000120701 477 ntBASIC7.14□□□□□ -1.27
Cux1P53564 Gm29228-201ENSMUST00000185489 418 ntBASIC7.14□□□□□ -1.27
Cux1P53564 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC7.14□□□□□ -1.27
Cux1P53564 Gm4045-201ENSMUST00000204076 310 ntBASIC7.14□□□□□ -1.27
Cux1P53564 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC7.14□□□□□ -1.27
Cux1P53564 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC7.14□□□□□ -1.27
Cux1P53564 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Cux1P53564 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Cux1P53564 Mir26a-2-201ENSMUST00000083496 84 ntBASIC7.14□□□□□ -1.27
Cux1P53564 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Cux1P53564 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Cux1P53564 Gm37833-201ENSMUST00000194342 3256 ntBASIC7.14□□□□□ -1.27
Cux1P53564 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Cux1P53564 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cux1P53564 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Cux1P53564 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cux1P53564 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cux1P53564 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Cux1P53564 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC7.13□□□□□ -1.27
Cux1P53564 AC122317.3-201ENSMUST00000219320 3524 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Cux1P53564 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Cux1P53564 Gm14575-201ENSMUST00000117210 560 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Gm8215-201ENSMUST00000120627 990 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Gm13484-201ENSMUST00000120738 412 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC7.13□□□□□ -1.27
Cux1P53564 Gm23905-201ENSMUST00000157568 109 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Gm27037-201ENSMUST00000182270 960 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC7.13□□□□□ -1.27
Cux1P53564 Gm28389-201ENSMUST00000190090 697 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Gm43710-201ENSMUST00000199583 452 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Gm46190-201ENSMUST00000219650 427 ntBASIC7.13□□□□□ -1.27
Cux1P53564 AC156790.5-201ENSMUST00000227075 231 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Cux1P53564 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC7.13□□□□□ -1.27
Cux1P53564 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Cux1P53564 Gm43428-201ENSMUST00000200108 3845 ntBASIC7.13□□□□□ -1.27
Cux1P53564 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cux1P53564 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cux1P53564 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Cux1P53564 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cux1P53564 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cux1P53564 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Cux1P53564 Gm12427-201ENSMUST00000117719 302 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Gm13567-201ENSMUST00000118026 247 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Gm14916-201ENSMUST00000121904 204 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Gm25292-201ENSMUST00000122797 322 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC7.12□□□□□ -1.27
Cux1P53564 Gm18482-201ENSMUST00000202405 760 ntBASIC7.12□□□□□ -1.27
Cux1P53564 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cux1P53564 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Cux1P53564 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cux1P53564 AC133189.2-201ENSMUST00000228527 392 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cux1P53564 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
Cux1P53564 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Cux1P53564 AC153964.1-201ENSMUST00000219677 3142 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Cux1P53564 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Cux1P53564 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Cux1P53564 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
Cux1P53564 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
Cux1P53564 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cux1P53564 Gm44224-201ENSMUST00000204131 1463 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cux1P53564 Gm37964-201ENSMUST00000192459 4905 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cux1P53564 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cux1P53564 Gm13854-201ENSMUST00000121183 1679 ntBASIC7.12□□□□□ -1.27
Cux1P53564 Gm12719-201ENSMUST00000118859 241 ntBASIC7.11□□□□□ -1.27
Cux1P53564 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC7.11□□□□□ -1.27
Cux1P53564 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC7.11□□□□□ -1.27
Cux1P53564 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cux1P53564 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC7.11□□□□□ -1.27
Cux1P53564 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms