Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.78□□□□□ -1.48
Shmt1P50431 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Shmt1P50431 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.78□□□□□ -1.48
Shmt1P50431 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Shmt1P50431 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Shmt1P50431 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Shmt1P50431 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Shmt1P50431 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Shmt1P50431 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.78□□□□□ -1.48
Shmt1P50431 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
Shmt1P50431 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm8595-201ENSMUST00000118250 630 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm14769-201ENSMUST00000118590 432 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm13488-201ENSMUST00000120419 179 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm14360-201ENSMUST00000120670 393 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm11825-201ENSMUST00000120710 736 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm25052-201ENSMUST00000122661 158 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm25981-201ENSMUST00000157921 295 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Mir1963-201ENSMUST00000158594 59 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm3221-201ENSMUST00000164869 440 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Mir3090-201ENSMUST00000175597 87 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm8941-201ENSMUST00000181451 899 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm29534-201ENSMUST00000187328 382 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm36638-201ENSMUST00000193295 400 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm37054-201ENSMUST00000193481 543 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm29813-201ENSMUST00000195856 447 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Mir6994-201ENSMUST00000198985 73 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm7825-201ENSMUST00000204046 416 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm18007-201ENSMUST00000205019 844 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm45658-201ENSMUST00000209197 580 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Shmt1P50431 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Shmt1P50431 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Shmt1P50431 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm23511-201ENSMUST00000083084 164 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gm23104-201ENSMUST00000083722 104 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Shmt1P50431 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.77□□□□□ -1.49
Shmt1P50431 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Shmt1P50431 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Shmt1P50431 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Shmt1P50431 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Shmt1P50431 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Shmt1P50431 Lipe-203ENSMUST00000105177 1251 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm25848-201ENSMUST00000116790 144 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm14601-201ENSMUST00000120892 236 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm15428-201ENSMUST00000121352 333 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm11894-201ENSMUST00000121579 328 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm12317-201ENSMUST00000122307 319 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC5.76□□□□□ -1.49
Shmt1P50431 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm22794-201ENSMUST00000157228 306 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm17223-201ENSMUST00000171413 481 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm8151-201ENSMUST00000184817 871 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm18350-201ENSMUST00000187395 955 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm28927-201ENSMUST00000191528 272 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms