Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Traf1P39428 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Traf1P39428 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Traf1P39428 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Traf1P39428 Gm14385-201ENSMUST00000116315 876 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm16394-201ENSMUST00000117289 675 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm15185-201ENSMUST00000117397 746 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm15034-201ENSMUST00000120043 349 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm23837-201ENSMUST00000122656 286 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.83□□□□□ -1.48
Traf1P39428 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Traf1P39428 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Mir6986-201ENSMUST00000184483 58 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm28094-201ENSMUST00000185262 390 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Traf1P39428 Gm37492-201ENSMUST00000191948 376 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.83□□□□□ -1.48
Traf1P39428 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.83□□□□□ -1.48
Traf1P39428 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.83□□□□□ -1.48
Traf1P39428 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.83□□□□□ -1.48
Traf1P39428 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.83□□□□□ -1.48
Traf1P39428 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.83□□□□□ -1.48
Traf1P39428 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm7822-201ENSMUST00000222433 581 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Traf1P39428 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Traf1P39428 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.83□□□□□ -1.48
Traf1P39428 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.83□□□□□ -1.48
Traf1P39428 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Traf1P39428 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Traf1P39428 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Traf1P39428 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Traf1P39428 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Traf1P39428 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Traf1P39428 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Traf1P39428 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Traf1P39428 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Traf1P39428 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Traf1P39428 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Traf1P39428 Gm24117-201ENSMUST00000103973 133 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm11486-201ENSMUST00000107322 478 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm8145-201ENSMUST00000118220 745 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm14560-201ENSMUST00000118672 375 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm11790-201ENSMUST00000119569 455 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm15828-201ENSMUST00000119911 522 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm15390-201ENSMUST00000120323 738 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Traf1P39428 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Traf1P39428 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.82□□□□□ -1.48
Traf1P39428 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Traf1P39428 Gm25019-201ENSMUST00000179732 110 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Traf1P39428 V1rg10-201ENSMUST00000183378 937 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.82□□□□□ -1.48
Traf1P39428 Gm28503-201ENSMUST00000185966 147 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.82□□□□□ -1.48
Traf1P39428 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.82□□□□□ -1.48
Traf1P39428 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm29785-201ENSMUST00000217033 383 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Traf1P39428 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm4057-201ENSMUST00000221407 368 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm272-201ENSMUST00000222073 919 ntBASIC5.82□□□□□ -1.48
Traf1P39428 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.82□□□□□ -1.48
Traf1P39428 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.82□□□□□ -1.48
Traf1P39428 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Traf1P39428 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Traf1P39428 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Traf1P39428 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.82□□□□□ -1.48
Traf1P39428 Gm24142-201ENSMUST00000101960 107 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Traf1P39428 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm5133-201ENSMUST00000118940 1255 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm13118-201ENSMUST00000120402 549 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm14229-201ENSMUST00000121178 850 ntBASIC5.81□□□□□ -1.48
Traf1P39428 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.81□□□□□ -1.48
Traf1P39428 Gm23121-201ENSMUST00000157653 173 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm22326-201ENSMUST00000158897 351 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Traf1P39428 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 Gm37884-201ENSMUST00000191857 818 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm18482-201ENSMUST00000202405 760 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm29815-201ENSMUST00000202418 178 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm3816-201ENSMUST00000209803 433 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm17999-201ENSMUST00000211568 542 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Gm19936-201ENSMUST00000216414 838 ntBASIC5.81□□□□□ -1.48
Traf1P39428 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.81□□□□□ -1.48
Traf1P39428 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.81□□□□□ -1.48
Traf1P39428 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Traf1P39428 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Traf1P39428 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms