Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Sdc1P18828 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Sdc1P18828 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Sdc1P18828 Gm37749-201ENSMUST00000193917 1899 ntBASIC3.9□□□□□ -1.78
Sdc1P18828 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Sdc1P18828 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Sdc1P18828 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC3.9□□□□□ -1.78
Sdc1P18828 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Sdc1P18828 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Sdc1P18828 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm15074-201ENSMUST00000117603 936 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm15233-201ENSMUST00000118747 400 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm11852-201ENSMUST00000120806 222 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm22343-201ENSMUST00000122648 286 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm16259-201ENSMUST00000145241 553 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm23993-201ENSMUST00000157478 144 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm22599-201ENSMUST00000157597 132 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm26371-201ENSMUST00000157829 104 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm9597-201ENSMUST00000171913 602 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Mir3095-201ENSMUST00000175552 87 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm28468-201ENSMUST00000188536 615 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm4856-201ENSMUST00000192696 1091 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC3.9□□□□□ -1.79
Sdc1P18828 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Igkv4-73-201ENSMUST00000199760 358 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 AC120011.1-201ENSMUST00000202147 744 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm8703-201ENSMUST00000203793 730 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm4290-201ENSMUST00000206897 814 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm39197-201ENSMUST00000212069 457 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm19170-201ENSMUST00000212440 1084 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC3.9□□□□□ -1.79
Sdc1P18828 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC3.9□□□□□ -1.79
Sdc1P18828 AC165260.3-201ENSMUST00000225101 665 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 AC124709.3-201ENSMUST00000227294 171 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm26072-201ENSMUST00000083135 107 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm24763-201ENSMUST00000083688 190 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
Sdc1P18828 AC155805.1-201ENSMUST00000222419 3808 ntBASIC3.9□□□□□ -1.79
Sdc1P18828 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Sdc1P18828 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm44567-201ENSMUST00000205645 2631 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm22468-201ENSMUST00000116680 120 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm26248-201ENSMUST00000116700 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm26137-201ENSMUST00000116701 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm26190-201ENSMUST00000116704 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm24617-201ENSMUST00000116705 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm25778-201ENSMUST00000116713 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm25774-201ENSMUST00000116717 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm22102-201ENSMUST00000116730 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm23177-201ENSMUST00000116784 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm24193-201ENSMUST00000116801 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm24744-201ENSMUST00000116833 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm24427-201ENSMUST00000116896 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm22346-201ENSMUST00000116918 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm23606-201ENSMUST00000116938 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm22029-201ENSMUST00000116940 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm26298-201ENSMUST00000116956 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm23844-201ENSMUST00000116959 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm24484-201ENSMUST00000117009 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm25347-201ENSMUST00000117026 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm22112-201ENSMUST00000117032 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm14529-201ENSMUST00000117894 406 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm13156-201ENSMUST00000118348 321 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm12387-201ENSMUST00000118573 955 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm15745-201ENSMUST00000119807 115 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm16179-201ENSMUST00000120685 373 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm14531-201ENSMUST00000120845 285 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm13132-201ENSMUST00000121194 472 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm12978-201ENSMUST00000121250 522 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 n-R5s174-201ENSMUST00000122638 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm17366-201ENSMUST00000167629 187 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sdc1P18828 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sdc1P18828 Gm22991-201ENSMUST00000178126 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm25754-201ENSMUST00000178653 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm22419-201ENSMUST00000178780 121 ntBASIC3.89□□□□□ -1.79
Sdc1P18828 Gm24802-201ENSMUST00000178897 121 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms