Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col1a1P11087 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.5□□□□□ -1.53
Col1a1P11087 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col1a1P11087 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col1a1P11087 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col1a1P11087 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col1a1P11087 Gm6584-201ENSMUST00000119671 447 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Gm15745-201ENSMUST00000119807 115 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Gm12893-201ENSMUST00000121732 275 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Gm25264-201ENSMUST00000158519 117 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Mir5710-201ENSMUST00000176884 69 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Gm2522-201ENSMUST00000204280 322 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col1a1P11087 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col1a1P11087 Gm3338-201ENSMUST00000220982 269 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.5□□□□□ -1.53
Col1a1P11087 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col1a1P11087 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.5□□□□□ -1.53
Col1a1P11087 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col1a1P11087 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col1a1P11087 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col1a1P11087 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.5□□□□□ -1.53
Col1a1P11087 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col1a1P11087 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col1a1P11087 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Col1a1P11087 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col1a1P11087 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.49□□□□□ -1.53
Col1a1P11087 Gm26146-201ENSMUST00000104478 185 ntBASIC5.49□□□□□ -1.53
Col1a1P11087 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC5.49□□□□□ -1.53
Col1a1P11087 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.49□□□□□ -1.53
Col1a1P11087 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Col1a1P11087 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col1a1P11087 Gm4045-201ENSMUST00000204076 310 ntBASIC5.49□□□□□ -1.53
Col1a1P11087 Gm32536-201ENSMUST00000205209 445 ntBASIC5.49□□□□□ -1.53
Col1a1P11087 Gm5338-201ENSMUST00000209530 639 ntBASIC5.49□□□□□ -1.53
Col1a1P11087 Gm8556-201ENSMUST00000210437 664 ntBASIC5.49□□□□□ -1.53
Col1a1P11087 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col1a1P11087 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col1a1P11087 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col1a1P11087 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col1a1P11087 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.49□□□□□ -1.53
Col1a1P11087 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.49□□□□□ -1.53
Col1a1P11087 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col1a1P11087 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col1a1P11087 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col1a1P11087 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col1a1P11087 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col1a1P11087 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col1a1P11087 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col1a1P11087 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 Gm14303-201ENSMUST00000121320 171 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.48□□□□□ -1.53
Col1a1P11087 Gm42830-201ENSMUST00000196642 313 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.48□□□□□ -1.53
Col1a1P11087 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.48□□□□□ -1.53
Col1a1P11087 Gm45392-201ENSMUST00000210441 214 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 Gm9616-201ENSMUST00000221154 781 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col1a1P11087 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col1a1P11087 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col1a1P11087 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col1a1P11087 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col1a1P11087 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.48□□□□□ -1.53
Col1a1P11087 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.48□□□□□ -1.53
Col1a1P11087 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Col1a1P11087 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col1a1P11087 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col1a1P11087 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col1a1P11087 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col1a1P11087 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col1a1P11087 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Col1a1P11087 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col1a1P11087 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Col1a1P11087 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Col1a1P11087 Gm14775-201ENSMUST00000122089 310 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col1a1P11087 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.47□□□□□ -1.53
Col1a1P11087 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col1a1P11087 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Gm22243-201ENSMUST00000178754 120 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Gm7449-201ENSMUST00000194393 663 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.47□□□□□ -1.53
Col1a1P11087 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col1a1P11087 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Col1a1P11087 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col1a1P11087 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col1a1P11087 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col1a1P11087 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms