Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm7034-201ENSMUST00000218638 645 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm9110-201ENSMUST00000219035 617 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hoxd3P09027 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm22865-201ENSMUST00000083949 214 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm44101-201ENSMUST00000203951 2221 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm6101-201ENSMUST00000195384 1867 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Sec24c-202ENSMUST00000223751 4196 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Snhg17-209ENSMUST00000186993 3144 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm24519-201ENSMUST00000104507 132 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm14355-201ENSMUST00000117352 264 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm11908-201ENSMUST00000117755 347 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm11889-201ENSMUST00000118402 1079 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm25178-201ENSMUST00000122633 325 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm23888-201ENSMUST00000122690 253 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm14333-201ENSMUST00000130484 264 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm22728-201ENSMUST00000158087 129 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm17109-201ENSMUST00000163985 358 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm24756-201ENSMUST00000177002 96 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm4761-201ENSMUST00000178086 582 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm2092-201ENSMUST00000178887 639 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm25617-201ENSMUST00000179548 133 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm2759-201ENSMUST00000179938 639 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Mir6238-201ENSMUST00000184140 129 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29048-201ENSMUST00000185342 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29403-201ENSMUST00000185491 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28234-201ENSMUST00000185657 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28781-201ENSMUST00000185760 696 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28248-201ENSMUST00000186093 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29633-202ENSMUST00000186217 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28829-201ENSMUST00000186231 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28261-201ENSMUST00000186417 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28815-201ENSMUST00000186751 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28608-201ENSMUST00000186860 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28420-201ENSMUST00000187340 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29307-201ENSMUST00000187367 696 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28106-201ENSMUST00000187640 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28698-201ENSMUST00000187734 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29224-201ENSMUST00000187965 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29189-201ENSMUST00000188018 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29476-201ENSMUST00000188397 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29505-201ENSMUST00000188424 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28125-201ENSMUST00000188470 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29391-201ENSMUST00000188545 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29280-201ENSMUST00000188571 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28349-201ENSMUST00000188590 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28213-201ENSMUST00000189183 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29377-205ENSMUST00000189603 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29339-201ENSMUST00000189613 696 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28327-201ENSMUST00000189638 615 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms