Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm29550-201ENSMUST00000185543 285 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm28560-201ENSMUST00000186091 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm28334-201ENSMUST00000186653 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm18185-201ENSMUST00000186725 667 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm28495-201ENSMUST00000188452 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm28232-201ENSMUST00000188683 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm28481-201ENSMUST00000189231 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm29059-201ENSMUST00000191534 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm37765-201ENSMUST00000192395 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm37237-201ENSMUST00000192893 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm36968-201ENSMUST00000193737 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm38290-201ENSMUST00000195238 315 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm32158-201ENSMUST00000200135 404 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm44225-201ENSMUST00000203582 186 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm44048-201ENSMUST00000204531 361 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 AC157017.1-201ENSMUST00000220148 364 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 AC124569.1-201ENSMUST00000225932 101 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 AC154846.2-201ENSMUST00000228805 424 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm24921-201ENSMUST00000083024 107 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Mir30b-201ENSMUST00000083542 96 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm26176-201ENSMUST00000083795 105 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm44209-201ENSMUST00000204556 4153 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.08□□□□□ -1.28
NpcdF8VQB8 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NpcdF8VQB8 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm14794-201ENSMUST00000118181 192 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm11550-201ENSMUST00000118210 699 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm4989-201ENSMUST00000118711 749 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm14352-201ENSMUST00000119250 449 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm13574-201ENSMUST00000120482 394 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm13077-201ENSMUST00000121941 484 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm24860-201ENSMUST00000158457 276 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Mir5101-201ENSMUST00000175181 83 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm26970-201ENSMUST00000182990 964 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm34015-201ENSMUST00000194908 451 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm9632-201ENSMUST00000195934 643 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm42958-201ENSMUST00000197595 318 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm9057-201ENSMUST00000198791 296 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm31230-201ENSMUST00000199725 785 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm44132-201ENSMUST00000205142 151 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm5318-201ENSMUST00000205249 406 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Gm30155-201ENSMUST00000223458 339 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Mir412-201ENSMUST00000083636 80 ntBASIC7.07□□□□□ -1.28
NpcdF8VQB8 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
NpcdF8VQB8 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms