Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm14651-201ENSMUST00000147192 442 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm20811-201ENSMUST00000190500 553 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm37889-201ENSMUST00000194174 251 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm37341-201ENSMUST00000194680 371 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm5050-201ENSMUST00000197164 775 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm22897-202ENSMUST00000197782 127 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm46146-201ENSMUST00000217483 346 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm4263-202ENSMUST00000221392 667 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm5229-201ENSMUST00000039375 354 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm26340-201ENSMUST00000102365 99 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm22267-201ENSMUST00000104008 131 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm7146-201ENSMUST00000116079 739 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm12448-201ENSMUST00000118852 655 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm14106-201ENSMUST00000119382 438 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm8757-201ENSMUST00000119660 372 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm11522-201ENSMUST00000120533 176 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm12322-201ENSMUST00000121605 389 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm24910-201ENSMUST00000157289 272 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm6673-201ENSMUST00000166114 700 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm17054-201ENSMUST00000169811 259 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm18522-201ENSMUST00000173947 650 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm5871-201ENSMUST00000176461 718 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm24315-201ENSMUST00000177835 127 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Snord116l12-201ENSMUST00000179816 94 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm27957-201ENSMUST00000184054 127 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm18667-201ENSMUST00000186523 484 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm29216-201ENSMUST00000187117 492 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdh1F7BJK1 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms