Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm28591-201ENSMUST00000185259 183 ntBASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Gm44243-201ENSMUST00000204323 692 ntBASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Col6a3E9PWQ3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm12752-201ENSMUST00000121657 811 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm42989-201ENSMUST00000200646 2306 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm23697-201ENSMUST00000103897 110 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm23133-201ENSMUST00000104255 135 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm14539-201ENSMUST00000117527 174 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm9317-201ENSMUST00000197055 862 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm44513-201ENSMUST00000206811 439 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm44681-201ENSMUST00000208447 842 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Col6a3E9PWQ3 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm15268-201ENSMUST00000118845 352 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm14562-201ENSMUST00000129885 543 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm24774-201ENSMUST00000157384 134 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm3338-201ENSMUST00000220982 269 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm24735-201ENSMUST00000158859 118 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm6929-201ENSMUST00000210930 468 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Gm23300-201ENSMUST00000082712 125 ntBASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Col6a3E9PWQ3 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm12413-201ENSMUST00000121508 312 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm24937-201ENSMUST00000122597 134 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm44984-201ENSMUST00000207802 394 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Gm16419-201ENSMUST00000221057 625 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Col6a3E9PWQ3 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms