Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm42830-201ENSMUST00000196642 313 ntBASIC4.84□□□□□ -1.64
Scn1aA2APX8 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm24469-201ENSMUST00000104487 131 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm16394-201ENSMUST00000117289 675 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm14750-201ENSMUST00000118262 516 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm14619-201ENSMUST00000120480 168 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm22601-201ENSMUST00000157595 250 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Mir1947-201ENSMUST00000158235 85 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm25534-201ENSMUST00000175365 125 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm44253-201ENSMUST00000203387 628 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm18442-201ENSMUST00000220925 639 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Gm6988-201ENSMUST00000222676 375 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Scn1aA2APX8 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.83□□□□□ -1.64
Scn1aA2APX8 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Scn1aA2APX8 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Mir711-201ENSMUST00000102188 82 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm23193-201ENSMUST00000102427 82 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm24636-201ENSMUST00000158673 288 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm6155-201ENSMUST00000173735 341 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm20203-201ENSMUST00000192352 332 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm17779-201ENSMUST00000213395 394 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm14610-201ENSMUST00000118358 966 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm24444-201ENSMUST00000157244 308 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm22311-201ENSMUST00000158006 110 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm25605-201ENSMUST00000158364 124 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm3084-201ENSMUST00000169967 598 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm20657-201ENSMUST00000177079 515 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm27940-201ENSMUST00000184449 98 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm9616-201ENSMUST00000221154 781 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Gm25147-201ENSMUST00000083030 105 ntBASIC4.82□□□□□ -1.64
Scn1aA2APX8 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scn1aA2APX8 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.81□□□□□ -1.64
Scn1aA2APX8 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Gm43386-201ENSMUST00000199654 4001 ntBASIC4.81□□□□□ -1.64
Scn1aA2APX8 Gm15603-201ENSMUST00000119252 492 ntBASIC4.81□□□□□ -1.64
Scn1aA2APX8 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Gm37878-201ENSMUST00000192108 387 ntBASIC4.81□□□□□ -1.64
Scn1aA2APX8 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.81□□□□□ -1.64
Scn1aA2APX8 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scn1aA2APX8 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms