Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb3S4R1G7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb3S4R1G7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb3S4R1G7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb3S4R1G7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb3S4R1G7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.87■□□□□ 0.13
H2afb3S4R1G7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb3S4R1G7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb3S4R1G7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Gm7290-201ENSMUST00000104990 617 ntBASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Gm12918-201ENSMUST00000120234 636 ntBASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Gm15710-201ENSMUST00000121821 636 ntBASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Gm5075-201ENSMUST00000196916 622 ntBASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb3S4R1G7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Gm18284-201ENSMUST00000172604 624 ntBASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.85■□□□□ 0.13
H2afb3S4R1G7 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb3S4R1G7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
H2afb3S4R1G7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
H2afb3S4R1G7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
H2afb3S4R1G7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb3S4R1G7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
H2afb3S4R1G7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb3S4R1G7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.83■□□□□ 0.12
H2afb3S4R1G7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb3S4R1G7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb3S4R1G7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb3S4R1G7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms