Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn9Q9Z0S7 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Dio3-201ENSMUST00000097228 1449 ntBASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Mtag2-201ENSMUST00000058665 714 ntBASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn9Q9Z0S7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Mir2861-201ENSMUST00000175539 82 ntBASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn9Q9Z0S7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Gm12896-201ENSMUST00000118430 226 ntBASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Cldn9Q9Z0S7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Cldn9Q9Z0S7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Cldn9Q9Z0S7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms