Protein–RNA interactions for Protein: Q9WUU8

Tnip1, TNFAIP3-interacting protein 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnip1Q9WUU8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnip1Q9WUU8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tnip1Q9WUU8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnip1Q9WUU8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnip1Q9WUU8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnip1Q9WUU8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnip1Q9WUU8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tnip1Q9WUU8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnip1Q9WUU8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Mir3081-201ENSMUST00000175305 84 ntBASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnip1Q9WUU8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnip1Q9WUU8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Gm10418-201ENSMUST00000100943 576 ntBASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Gm11950-201ENSMUST00000121615 838 ntBASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnip1Q9WUU8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Tnip1Q9WUU8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Mzt1-203ENSMUST00000227948 952 ntBASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnip1Q9WUU8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnip1Q9WUU8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.83■□□□□ 0.93
Tnip1Q9WUU8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnip1Q9WUU8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Tnip1Q9WUU8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnip1Q9WUU8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnip1Q9WUU8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnip1Q9WUU8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnip1Q9WUU8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnip1Q9WUU8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnip1Q9WUU8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnip1Q9WUU8 Gm27357-201ENSMUST00000183754 135 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms