Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phtf1Q9QZ09 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Phtf1Q9QZ09 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Mir8112-201ENSMUST00000184382 131 ntBASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phtf1Q9QZ09 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Mir5122-201ENSMUST00000175004 89 ntBASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Phtf1Q9QZ09 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Phtf1Q9QZ09 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Phtf1Q9QZ09 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Phtf1Q9QZ09 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Phtf1Q9QZ09 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Phtf1Q9QZ09 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.33■□□□□ 0.68
Phtf1Q9QZ09 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Gm4974-201ENSMUST00000209974 875 ntBASIC19.32■□□□□ 0.68
Phtf1Q9QZ09 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms